Package bio.singa.simulation.reactions.reactors

Class ReactionChainBuilder.RemoveReactionChainBuilder

java.lang.Object

bio.singa.simulation.reactions.reactors.ReactionChainBuilder.AbstractReactorBuilder

bio.singa.simulation.reactions.reactors.ReactionChainBuilder.RemoveReactionChainBuilder

All Implemented Interfaces:

ReactionChainBuilder.ConnectorStep, ReactionChainBuilder.ReactorChoiceStep, ReactionChainBuilder.RemoveReactorPrimaryConditionStep, ReactionChainBuilder.RemoveReactorSecondarySubstrateStep

Enclosing class:

ReactionChainBuilder

public static class ReactionChainBuilder.RemoveReactionChainBuilder
extends ReactionChainBuilder.AbstractReactorBuilder
implements ReactionChainBuilder.RemoveReactorPrimaryConditionStep, ReactionChainBuilder.RemoveReactorSecondarySubstrateStep

Field Summary

Fields inherited from class bio.singa.simulation.reactions.reactors.ReactionChainBuilder.AbstractReactorBuilder

bindingSite, considerInversion, modification, primaryCandidateConditions, primaryEntity, reactors, secondaryCandidateConditions, secondaryEntity

Constructor Summary

Constructors

Constructor	Description
RemoveReactionChainBuilder(BindingSite bindingSite, ChemicalEntity secondaryEntity)
RemoveReactionChainBuilder(ChemicalEntity secondaryEntity)

Method Summary

Modifier and Type	Method	Description
ReactionChainBuilder.RemoveReactorPrimaryConditionStep	condition(CandidateCondition condition)
ReactionChainBuilder.RemoveReactorPrimaryConditionStep	from(ChemicalEntity primaryEntity)

Methods inherited from class bio.singa.simulation.reactions.reactors.ReactionChainBuilder.AbstractReactorBuilder

add, add, and, bind, bind, build, considerInversion, identifier, oneToOneAssignment, release, release, remove, remove

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface bio.singa.simulation.reactions.reactors.ReactionChainBuilder.ConnectorStep

and, build, considerInversion, identifier

Constructor Detail

RemoveReactionChainBuilder

public RemoveReactionChainBuilder(BindingSite bindingSite,
                                  ChemicalEntity secondaryEntity)

RemoveReactionChainBuilder

public RemoveReactionChainBuilder(ChemicalEntity secondaryEntity)

Method Detail

condition

public ReactionChainBuilder.RemoveReactorPrimaryConditionStep condition(CandidateCondition condition)

Specified by:

condition in interface ReactionChainBuilder.RemoveReactorPrimaryConditionStep

from

public ReactionChainBuilder.RemoveReactorPrimaryConditionStep from(ChemicalEntity primaryEntity)

Specified by:

from in interface ReactionChainBuilder.RemoveReactorSecondarySubstrateStep