Package bio.singa.simulation.reactions.reactors

Class ReactionChainBuilder.ReleaseReactionChainBuilder

java.lang.Object

bio.singa.simulation.reactions.reactors.ReactionChainBuilder.AbstractReactorBuilder

bio.singa.simulation.reactions.reactors.ReactionChainBuilder.ReleaseReactionChainBuilder

All Implemented Interfaces:

ReactionChainBuilder.ConnectorStep, ReactionChainBuilder.ReactorChoiceStep, ReactionChainBuilder.ReleaseReactorPrimaryConditionStep, ReactionChainBuilder.ReleaseReactorSecondarySubstrateStep

Enclosing class:

ReactionChainBuilder

public static class ReactionChainBuilder.ReleaseReactionChainBuilder
extends ReactionChainBuilder.AbstractReactorBuilder
implements ReactionChainBuilder.ReleaseReactorPrimaryConditionStep, ReactionChainBuilder.ReleaseReactorSecondarySubstrateStep

Field Summary

Fields inherited from class bio.singa.simulation.reactions.reactors.ReactionChainBuilder.AbstractReactorBuilder

bindingSite, considerInversion, modification, primaryCandidateConditions, primaryEntity, reactors, secondaryCandidateConditions, secondaryEntity

Constructor Summary

Constructors

Constructor	Description
ReleaseReactionChainBuilder(BindingSite bindingSite, ChemicalEntity primaryEntity)
ReleaseReactionChainBuilder(ChemicalEntity primaryEntity)

Method Summary

Modifier and Type	Method	Description
ReactionChainBuilder.ReleaseReactorPrimaryConditionStep	condition(CandidateCondition condition)
ReactionChainBuilder.ReleaseReactorPrimaryConditionStep	from(ChemicalEntity secondaryEntity)

Methods inherited from class bio.singa.simulation.reactions.reactors.ReactionChainBuilder.AbstractReactorBuilder

add, add, and, bind, bind, build, considerInversion, identifier, oneToOneAssignment, release, release, remove, remove

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface bio.singa.simulation.reactions.reactors.ReactionChainBuilder.ConnectorStep

and, build, considerInversion, identifier

Constructor Detail

ReleaseReactionChainBuilder

public ReleaseReactionChainBuilder(BindingSite bindingSite,
                                   ChemicalEntity primaryEntity)

ReleaseReactionChainBuilder

public ReleaseReactionChainBuilder(ChemicalEntity primaryEntity)

Method Detail

condition

public ReactionChainBuilder.ReleaseReactorPrimaryConditionStep condition(CandidateCondition condition)

Specified by:

condition in interface ReactionChainBuilder.ReleaseReactorPrimaryConditionStep

from

public ReactionChainBuilder.ReleaseReactorPrimaryConditionStep from(ChemicalEntity secondaryEntity)

Specified by:

from in interface ReactionChainBuilder.ReleaseReactorSecondarySubstrateStep