Package bio.singa.simulation.reactions.modifications

Class AddModification

java.lang.Object

bio.singa.simulation.reactions.modifications.AbstractComplexEntityModification

bio.singa.simulation.reactions.modifications.AddModification

All Implemented Interfaces:

ComplexEntityModification

public class AddModification
extends AbstractComplexEntityModification

Author:

cl

Field Summary

Fields inherited from class bio.singa.simulation.reactions.modifications.AbstractComplexEntityModification

logger

Constructor Summary

Constructors

Constructor	Description
AddModification(BindingSite bindingSite, ChemicalEntity complexToAdd)

Method Summary

Modifier and Type	Method	Description
void	apply()
void	apply(ComplexEntity complex)
ComplexEntityModification	invert()
String	toString()

Methods inherited from class bio.singa.simulation.reactions.modifications.AbstractComplexEntityModification

addCandidate, clear, getBindingSite, getCandidates, getPrimaryEntity, getResults, getSecondaryEntity, setBindingSite, setCandidates, setPrimaryEntity, setResults, setSecondaryEntity

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Constructor Detail

AddModification

public AddModification(BindingSite bindingSite,
                       ChemicalEntity complexToAdd)

Method Detail

apply

public void apply()

apply

public void apply(ComplexEntity complex)

toString

public String toString()

Overrides:

toString in class Object

invert

public ComplexEntityModification invert()