Uses of Interface
bio.singa.simulation.reactions.conditions.CandidateCondition

Packages that use CandidateCondition

Package	Description
bio.singa.simulation.reactions.conditions
bio.singa.simulation.reactions.reactors

Uses of CandidateCondition in bio.singa.simulation.reactions.conditions

Classes in bio.singa.simulation.reactions.conditions that implement CandidateCondition

Modifier and Type	Class	Description
class	HasAnyNumberOfEntities
class	HasNoMoreThanNumberOfPartners
class	HasNumberOfEntities
class	HasOccupiedBindingSite
class	HasUnoccupiedBindingSite
class	IsOnlyBoundAt

Methods in bio.singa.simulation.reactions.conditions that return CandidateCondition

Modifier and Type	Method	Description
static CandidateCondition	CandidateConditionBuilder.hasAnyOfEntity(ChemicalEntity entity)
static CandidateCondition	CandidateConditionBuilder.hasNoMoreThanNumberOfPartners(ChemicalEntity entity, int number)
static CandidateCondition	CandidateConditionBuilder.hasNoneOfEntity(ChemicalEntity entity)
static CandidateCondition	CandidateConditionBuilder.hasNotNumberOfEntity(ChemicalEntity entity, int number)
static CandidateCondition	CandidateConditionBuilder.hasNumberOfEntity(ChemicalEntity entity, int number)
static CandidateCondition	CandidateConditionBuilder.hasOccupiedBindingSite(BindingSite bindingSite)
static CandidateCondition	CandidateConditionBuilder.hasOneOfEntity(ChemicalEntity entity)
static CandidateCondition	CandidateConditionBuilder.hasUnoccupiedBindingSite(BindingSite bindingSite)
static CandidateCondition	CandidateConditionBuilder.isOnlyBoundAt(BindingSite bindingSite)

Uses of CandidateCondition in bio.singa.simulation.reactions.reactors

Fields in bio.singa.simulation.reactions.reactors with type parameters of type CandidateCondition

Modifier and Type	Field	Description
protected List<CandidateCondition>	ReactionChainBuilder.AbstractReactorBuilder.primaryCandidateConditions
protected List<CandidateCondition>	ReactionChainBuilder.AbstractReactorBuilder.secondaryCandidateConditions

Methods in bio.singa.simulation.reactions.reactors that return types with arguments of type CandidateCondition

Modifier and Type	Method	Description
List<CandidateCondition>	AbstractGraphComplexReactor.getPrimaryCandidateConditions()
List<CandidateCondition>	TwoToOneReactor.getSecondCandidateConditions()

Methods in bio.singa.simulation.reactions.reactors with parameters of type CandidateCondition

Modifier and Type	Method	Description
ReactionChainBuilder.AddReactorPrimaryConditionStep	ReactionChainBuilder.AddReactionChainBuilder.condition(CandidateCondition condition)
ReactionChainBuilder.AddReactorPrimaryConditionStep	ReactionChainBuilder.AddReactorPrimaryConditionStep.condition(CandidateCondition condition)
ReactionChainBuilder.ReleaseReactorPrimaryConditionStep	ReactionChainBuilder.ReleaseReactionChainBuilder.condition(CandidateCondition condition)
ReactionChainBuilder.ReleaseReactorPrimaryConditionStep	ReactionChainBuilder.ReleaseReactorPrimaryConditionStep.condition(CandidateCondition condition)
ReactionChainBuilder.RemoveReactorPrimaryConditionStep	ReactionChainBuilder.RemoveReactionChainBuilder.condition(CandidateCondition condition)
ReactionChainBuilder.RemoveReactorPrimaryConditionStep	ReactionChainBuilder.RemoveReactorPrimaryConditionStep.condition(CandidateCondition condition)
ReactionChainBuilder.BindReactorPrimaryConditionStep	ReactionChainBuilder.BindReactionChainBuilder.primaryCondition(CandidateCondition condition)
ReactionChainBuilder.BindReactorPrimaryConditionStep	ReactionChainBuilder.BindReactorPrimaryConditionStep.primaryCondition(CandidateCondition condition)
ReactionChainBuilder.BindReactorSecondaryConditionStep	ReactionChainBuilder.BindReactionChainBuilder.secondaryCondition(CandidateCondition condition)
ReactionChainBuilder.BindReactorSecondaryConditionStep	ReactionChainBuilder.BindReactorSecondaryConditionStep.secondaryCondition(CandidateCondition condition)

Method parameters in bio.singa.simulation.reactions.reactors with type arguments of type CandidateCondition

Modifier and Type	Method	Description
void	AbstractGraphComplexReactor.setPrimaryCandidateConditions(List<CandidateCondition> primaryCandidateConditions)
void	TwoToOneReactor.setSecondCandidateConditions(List<CandidateCondition> secondCandidateConditions)