Package bio.singa.simulation.model.sections

Class CellSubsection

java.lang.Object

bio.singa.simulation.model.sections.CellSubsection

public class CellSubsection
extends Object

A cell subsection organizes the contents of a Updatable. Each subsection has its own ConcentrationPool and behaves independently of other subsections in the same CellRegion.

Author:

cl

Constructor Summary

Constructors

Constructor	Description
CellSubsection(String identifier)	Creates a new cell subsection with the given identifier and dynamic preferred concentration unit.
CellSubsection(String identifier, bio.singa.features.identifiers.GoTerm goTerm)
CellSubsection(String identifier, bio.singa.features.identifiers.GoTerm goTerm, boolean membrane)

Method Summary

Modifier and Type	Method	Description
boolean	equals(Object o)
bio.singa.features.identifiers.GoTerm	getGoTerm()
String	getIdentifier()	Returns the identifier.
int	hashCode()
boolean	isMembrane()
void	setGoTerm(bio.singa.features.identifiers.GoTerm goTerm)
void	setIdentifier(String identifier)
void	setMembrane(boolean membrane)
String	toString()

Methods inherited from class java.lang.Object

clone, finalize, getClass, notify, notifyAll, wait, wait, wait

Constructor Detail

CellSubsection

public CellSubsection(String identifier)

Creates a new cell subsection with the given identifier and dynamic preferred concentration unit.

Parameters:

identifier - The identifier.

CellSubsection

public CellSubsection(String identifier,
                      bio.singa.features.identifiers.GoTerm goTerm)

CellSubsection

public CellSubsection(String identifier,
                      bio.singa.features.identifiers.GoTerm goTerm,
                      boolean membrane)

Method Detail

getIdentifier

public String getIdentifier()

Returns the identifier.

Returns:

The identifier.

setIdentifier

public void setIdentifier(String identifier)

getGoTerm

public bio.singa.features.identifiers.GoTerm getGoTerm()

setGoTerm

public void setGoTerm(bio.singa.features.identifiers.GoTerm goTerm)

isMembrane

public boolean isMembrane()

setMembrane

public void setMembrane(boolean membrane)

toString

public String toString()

Overrides:

toString in class Object

equals

public boolean equals(Object o)

Overrides:

equals in class Object

hashCode

public int hashCode()

Overrides:

hashCode in class Object