Package bio.singa.simulation.model.modules.qualitative.implementations

Class EndocytoticPit

java.lang.Object

bio.singa.simulation.model.modules.qualitative.implementations.EndocytoticPit

All Implemented Interfaces:

Updatable

public class EndocytoticPit
extends Object
implements Updatable

Author:

cl

Field Summary

Fields

Modifier and Type	Field	Description
static AtomicInteger	pitCounter

Constructor Summary

Constructors

Constructor	Description
EndocytoticPit(AutomatonNode associatedNode)

Method Summary

Modifier and Type	Method	Description
void	addPotentialDelta(ConcentrationDelta potentialDelta)
Set<CellSubsection>	getAllReferencedSections()
AutomatonNode	getAssociatedNode()
CellRegion	getCellRegion()
javax.measure.Quantity<javax.measure.quantity.Time>	getCheckpointTime()
ConcentrationContainer	getConcentrationContainer()
ConcentrationDeltaManager	getConcentrationDeltaManager()
ConcentrationDeltaManager	getConcentrationManager()
int	getIdentifier()
bio.singa.mathematics.vectors.Vector2D	getPosition()
javax.measure.Quantity<javax.measure.quantity.Length>	getRadius()
bio.singa.mathematics.vectors.Vector2D	getSpawnSite()
String	getStringIdentifier()
boolean	isCollecting()
void	setCellRegion(CellRegion cellRegion)
void	setCheckpointTime(javax.measure.Quantity<javax.measure.quantity.Time> checkpointTime)
void	setCollecting(boolean collecting)
void	setConcentrationDeltaManager(ConcentrationDeltaManager concentrationDeltaManager)
void	setIdentifier(int identifier)
void	setRadius(javax.measure.Quantity<javax.measure.quantity.Length> radius)
void	setSpawnSite(bio.singa.mathematics.vectors.Vector2D spawnSite)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

pitCounter

public static AtomicInteger pitCounter

Constructor Detail

EndocytoticPit

public EndocytoticPit(AutomatonNode associatedNode)

Method Detail

getIdentifier

public int getIdentifier()

setIdentifier

public void setIdentifier(int identifier)

getCheckpointTime

public javax.measure.Quantity<javax.measure.quantity.Time> getCheckpointTime()

setCheckpointTime

public void setCheckpointTime(javax.measure.Quantity<javax.measure.quantity.Time> checkpointTime)

getSpawnSite

public bio.singa.mathematics.vectors.Vector2D getSpawnSite()

setSpawnSite

public void setSpawnSite(bio.singa.mathematics.vectors.Vector2D spawnSite)

getConcentrationDeltaManager

public ConcentrationDeltaManager getConcentrationDeltaManager()

setConcentrationDeltaManager

public void setConcentrationDeltaManager(ConcentrationDeltaManager concentrationDeltaManager)

getAssociatedNode

public AutomatonNode getAssociatedNode()

getStringIdentifier

public String getStringIdentifier()

Specified by:

getStringIdentifier in interface Updatable

getPosition

public bio.singa.mathematics.vectors.Vector2D getPosition()

Specified by:

getPosition in interface Updatable

getConcentrationManager

public ConcentrationDeltaManager getConcentrationManager()

Specified by:

getConcentrationManager in interface Updatable

getConcentrationContainer

public ConcentrationContainer getConcentrationContainer()

Specified by:

getConcentrationContainer in interface Updatable

addPotentialDelta

public void addPotentialDelta(ConcentrationDelta potentialDelta)

Specified by:

addPotentialDelta in interface Updatable

getCellRegion

public CellRegion getCellRegion()

Specified by:

getCellRegion in interface Updatable

setCellRegion

public void setCellRegion(CellRegion cellRegion)

getAllReferencedSections

public Set<CellSubsection> getAllReferencedSections()

Specified by:

getAllReferencedSections in interface Updatable

getRadius

public javax.measure.Quantity<javax.measure.quantity.Length> getRadius()

setRadius

public void setRadius(javax.measure.Quantity<javax.measure.quantity.Length> radius)

isCollecting

public boolean isCollecting()

setCollecting

public void setCollecting(boolean collecting)