Package bio.singa.simulation.model.modules.concentration.specifity

Class SectionSpecific

java.lang.Object

bio.singa.simulation.model.modules.concentration.specifity.SectionSpecific

All Implemented Interfaces:

UpdateSpecificity<SectionDeltaFunction>

public class SectionSpecific
extends Object
implements UpdateSpecificity<SectionDeltaFunction>

Section specific ConcentrationBasedModules calculate their AbstractDeltaFunction for every subsection of an updatable.

Author:

cl

Constructor Summary

Constructors

Constructor	Description
SectionSpecific(ConcentrationBasedModule module)	Initializes the update specificity for the corresponding module.

Method Summary

Modifier and Type	Method	Description
void	addDeltaFunction(SectionDeltaFunction sectionDeltaFunction)	Adds the implementation of a AbstractDeltaFunction to be calculated during simulation.
void	determineDeltas(ConcentrationContainer container)	Determines all deltas for a Concentration container.
void	processContainer(ConcentrationContainer container)	Processes a concentration container.
void	processContainer(ConcentrationContainer container, CellSubsection subsection, ChemicalEntity chemicalEntity)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

SectionSpecific

public SectionSpecific(ConcentrationBasedModule module)

Initializes the update specificity for the corresponding module.

Parameters:

module - The module.

Method Detail

processContainer

public void processContainer(ConcentrationContainer container)

Description copied from interface: UpdateSpecificity

Processes a concentration container.

Specified by:

processContainer in interface UpdateSpecificity<SectionDeltaFunction>

Parameters:

container - The container.

processContainer

public void processContainer(ConcentrationContainer container,
                             CellSubsection subsection,
                             ChemicalEntity chemicalEntity)

Specified by:

processContainer in interface UpdateSpecificity<SectionDeltaFunction>

determineDeltas

public void determineDeltas(ConcentrationContainer container)

Description copied from interface: UpdateSpecificity

Determines all deltas for a Concentration container.

Specified by:

determineDeltas in interface UpdateSpecificity<SectionDeltaFunction>

Parameters:

container - The container.

addDeltaFunction

public void addDeltaFunction(SectionDeltaFunction sectionDeltaFunction)

Description copied from interface: UpdateSpecificity

Adds the implementation of a AbstractDeltaFunction to be calculated during simulation.

Specified by:

addDeltaFunction in interface UpdateSpecificity<SectionDeltaFunction>

Parameters:

sectionDeltaFunction - The delta function.