Package bio.singa.simulation.model.modules.concentration.imlementations.reactions.behaviors.kineticlaws

Class AbstractKineticLaw

java.lang.Object

bio.singa.simulation.model.modules.concentration.imlementations.reactions.behaviors.kineticlaws.AbstractKineticLaw

All Implemented Interfaces:

KineticLaw

Direct Known Subclasses:

IrreversibleKineticLaw, MichaelisMentenKineticLaw, ReversibleKineticLaw

public abstract class AbstractKineticLaw
extends Object
implements KineticLaw

Author:

cl

Field Summary

Fields

Modifier and Type	Field	Description
protected Map<Class<? extends bio.singa.features.model.Feature>,RateConstant>	cachedFeature
protected Reaction	reaction

Constructor Summary

Constructors

Constructor	Description
AbstractKineticLaw(Reaction reaction)

Method Summary

Modifier and Type	Method	Description
<T extends bio.singa.features.model.Feature> T	getRate(Class<T> featureClass)
protected double	getScaledRate(Class<? extends bio.singa.features.model.Feature> featureClass)
protected double	multiply(List<ReactantConcentration> reactants)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface bio.singa.simulation.model.modules.concentration.imlementations.reactions.behaviors.kineticlaws.KineticLaw

determineVelocity

Field Detail

reaction

protected Reaction reaction

cachedFeature

protected Map<Class<? extends bio.singa.features.model.Feature>,RateConstant> cachedFeature

Constructor Detail

AbstractKineticLaw

public AbstractKineticLaw(Reaction reaction)

Method Detail

getScaledRate

protected double getScaledRate(Class<? extends bio.singa.features.model.Feature> featureClass)

getRate

public <T extends bio.singa.features.model.Feature> T getRate(Class<T> featureClass)

multiply

protected double multiply(List<ReactantConcentration> reactants)