bio.singa.simulation.model.sections

Class CellRegion

java.lang.Object

bio.singa.simulation.model.sections.CellRegion

public class CellRegion
extends Object

Author:

cl

Field Summary

Fields

Modifier and Type	Field and Description
static CellRegion	CYTOSOL_A
static CellRegion	CYTOSOL_B
static CellRegion	MEMBRANE

Constructor Summary

Constructors

Constructor and Description
CellRegion(String identifier)
CellRegion(String identifier, bio.singa.features.identifiers.GoTerm goTerm)

Method Summary

Modifier and Type	Method and Description
void	addSubsection(CellTopology topology, CellSubsection subsection)
boolean	equals(Object o)
bio.singa.features.identifiers.GoTerm	getGoTerm()
String	getIdentifier()
CellSubsection	getInnerSubsection()
CellSubsection	getMembraneSubsection()
CellSubsection	getOuterSubsection()
Collection<CellSubsection>	getSubsections()
int	hashCode()
boolean	hasMembrane()
ConcentrationContainer	setUpConcentrationContainer()
String	toString()

Methods inherited from class java.lang.Object

clone, finalize, getClass, notify, notifyAll, wait, wait, wait

Field Detail

CYTOSOL_A

public static CellRegion CYTOSOL_A

CYTOSOL_B

public static CellRegion CYTOSOL_B

MEMBRANE

public static CellRegion MEMBRANE

Constructor Detail

CellRegion

public CellRegion(String identifier)

CellRegion

public CellRegion(String identifier,
                  bio.singa.features.identifiers.GoTerm goTerm)

Method Detail

getIdentifier

public String getIdentifier()

getGoTerm

public bio.singa.features.identifiers.GoTerm getGoTerm()

addSubsection

public void addSubsection(CellTopology topology,
                          CellSubsection subsection)

getSubsections

public Collection<CellSubsection> getSubsections()

setUpConcentrationContainer

public ConcentrationContainer setUpConcentrationContainer()

getInnerSubsection

public CellSubsection getInnerSubsection()

getOuterSubsection

public CellSubsection getOuterSubsection()

getMembraneSubsection

public CellSubsection getMembraneSubsection()

hasMembrane

public boolean hasMembrane()

toString

public String toString()

Overrides:

toString in class Object

equals

public boolean equals(Object o)

Overrides:

equals in class Object

hashCode

public int hashCode()

Overrides:

hashCode in class Object