bio.singa.simulation.model.modules.concentration.imlementations.reactions.behaviors.deltas

Interface DeltaBehavior

All Known Implementing Classes:

NodeBehavior, VesicleBehavior

public interface DeltaBehavior

Author:

cl

Method Summary

Modifier and Type	Method and Description
default List<ReactantConcentration>	collectCatalysts()
default List<ReactantConcentration>	collectProducts()
List<ReactantConcentration>	collectReactants(Collection<Reactant> reactants)
default List<ReactantConcentration>	collectSubstrates()
default boolean	containsSubstrates(ConcentrationContainer concentrationContainer)
List<ReactantDelta>	generateDeltas(List<Reactant> reactants, double velocity)
default List<ReactantDelta>	generateProductDeltas(double velocity)
default List<ReactantDelta>	generateSubstrateDeltas(double velocity)
List<Reactant>	getCatalysts()
List<Reactant>	getProducts()
List<Reactant>	getSubstrates()

Method Detail

getSubstrates

List<Reactant> getSubstrates()

getProducts

List<Reactant> getProducts()

getCatalysts

List<Reactant> getCatalysts()

collectReactants

List<ReactantConcentration> collectReactants(Collection<Reactant> reactants)

collectCatalysts

default List<ReactantConcentration> collectCatalysts()

collectSubstrates

default List<ReactantConcentration> collectSubstrates()

collectProducts

default List<ReactantConcentration> collectProducts()

generateDeltas

List<ReactantDelta> generateDeltas(List<Reactant> reactants,
                                   double velocity)

generateSubstrateDeltas

default List<ReactantDelta> generateSubstrateDeltas(double velocity)

generateProductDeltas

default List<ReactantDelta> generateProductDeltas(double velocity)

containsSubstrates

default boolean containsSubstrates(ConcentrationContainer concentrationContainer)