bio.singa.simulation.model.modules.concentration.imlementations.reactions

Class Reaction

java.lang.Object

bio.singa.simulation.model.modules.concentration.ConcentrationBasedModule<UpdatableDeltaFunction>

bio.singa.simulation.model.modules.concentration.imlementations.reactions.Reaction

All Implemented Interfaces:

UpdateModule, Runnable

public class Reaction
extends ConcentrationBasedModule<UpdatableDeltaFunction>

Author:

cl

Field Summary

Fields inherited from class bio.singa.simulation.model.modules.concentration.ConcentrationBasedModule

supplier

Constructor Summary

Constructors

Constructor and Description
Reaction()

Method Summary

Modifier and Type	Method and Description
KineticLaw	getKineticLaw()
ReactantBehavior	getReactantBehavior()
void	setKineticLaw(KineticLaw kineticLaw)
void	setReactantBehavior(ReactantBehavior reactantBehavior)

Methods inherited from class bio.singa.simulation.model.modules.concentration.ConcentrationBasedModule

addDeltaFunction, addReferencedEntities, addReferencedEntity, calculateUpdates, checkFeatures, deltaIsValid, determineLargestLocalError, equals, getApplicationCondition, getDeltaCutoff, getErrorCutoff, getFeature, getFeatures, getIdentifier, getReferencedEntities, getRequiredFeatures, getScaledFeature, getScaledFeature, getScope, getSimulation, getSpecificity, getState, getSupplier, handleDelta, hashCode, initialize, onCompletion, onReset, optimizeTimeStep, resetState, run, setApplicationCondition, setDeltaCutoff, setErrorCutoff, setFeature, setIdentifier, setSimulation, toString

Methods inherited from class java.lang.Object

clone, finalize, getClass, notify, notifyAll, wait, wait, wait

Constructor Detail

Reaction

public Reaction()

Method Detail

getKineticLaw

public KineticLaw getKineticLaw()

setKineticLaw

public void setKineticLaw(KineticLaw kineticLaw)

getReactantBehavior

public ReactantBehavior getReactantBehavior()

setReactantBehavior

public void setReactantBehavior(ReactantBehavior reactantBehavior)