Uses of Package
bio.singa.simulation.model.modules.concentration

Packages that use bio.singa.simulation.model.modules.concentration

Package	Description
bio.singa.simulation.events
bio.singa.simulation.model.agents.pointlike
bio.singa.simulation.model.graphs
bio.singa.simulation.model.modules
bio.singa.simulation.model.modules.concentration
bio.singa.simulation.model.modules.concentration.functions
bio.singa.simulation.model.modules.concentration.imlementations
bio.singa.simulation.model.modules.concentration.scope
bio.singa.simulation.model.modules.concentration.specifity
bio.singa.simulation.model.modules.displacement
bio.singa.simulation.model.modules.qualitative
bio.singa.simulation.model.modules.qualitative.implementations
bio.singa.simulation.model.simulation

Classes in bio.singa.simulation.model.modules.concentration used by bio.singa.simulation.events

Class and Description
ConcentrationBasedModule Concentration based modules handle updates that are applied to the concentrations in Updatables during a simulation.

Classes in bio.singa.simulation.model.modules.concentration used by bio.singa.simulation.model.agents.pointlike

Class and Description
ConcentrationDelta The delta object manages the change that will be applied to the concentration of a specific ChemicalEntity in a CellSubsection.

Classes in bio.singa.simulation.model.modules.concentration used by bio.singa.simulation.model.graphs

Class and Description
ConcentrationDelta The delta object manages the change that will be applied to the concentration of a specific ChemicalEntity in a CellSubsection.
ConcentrationDeltaManager The ConcentrationDeltaManager handles current concentrations of an updatable and the updates to those concentrations that should be applied during simulation.

Classes in bio.singa.simulation.model.modules.concentration used by bio.singa.simulation.model.modules

Class and Description
ModuleState The state of the module is used to schedule the processing of modules in the UpdateScheduler.

Classes in bio.singa.simulation.model.modules.concentration used by bio.singa.simulation.model.modules.concentration

Class and Description
ConcentrationBasedModule Concentration based modules handle updates that are applied to the concentrations in Updatables during a simulation.
ConcentrationDelta The delta object manages the change that will be applied to the concentration of a specific ChemicalEntity in a CellSubsection.
ConcentrationDeltaIdentifier Used to identify changes to concentrations (ConcentrationDeltas) (mostly in maps).
FieldSupplier The field supplier manages all files required for different behaviours of a module.
LocalError The LocalError object stores the error as an result of the currently applied time step.
ModuleFactory.Scope The type of UpdateScope.
ModuleFactory.Specificity The type of UpdateSpecificity.
ModuleState The state of the module is used to schedule the processing of modules in the UpdateScheduler.

Classes in bio.singa.simulation.model.modules.concentration used by bio.singa.simulation.model.modules.concentration.functions

Class and Description
ConcentrationDelta The delta object manages the change that will be applied to the concentration of a specific ChemicalEntity in a CellSubsection.
ConcentrationDeltaIdentifier Used to identify changes to concentrations (ConcentrationDeltas) (mostly in maps).

Classes in bio.singa.simulation.model.modules.concentration used by bio.singa.simulation.model.modules.concentration.imlementations

Class and Description
ConcentrationBasedModule Concentration based modules handle updates that are applied to the concentrations in Updatables during a simulation.
ConcentrationDelta The delta object manages the change that will be applied to the concentration of a specific ChemicalEntity in a CellSubsection.
ModuleBuilder

Classes in bio.singa.simulation.model.modules.concentration used by bio.singa.simulation.model.modules.concentration.scope

Class and Description
ConcentrationBasedModule Concentration based modules handle updates that are applied to the concentrations in Updatables during a simulation.

Classes in bio.singa.simulation.model.modules.concentration used by bio.singa.simulation.model.modules.concentration.specifity

Class and Description
ConcentrationBasedModule Concentration based modules handle updates that are applied to the concentrations in Updatables during a simulation.

Classes in bio.singa.simulation.model.modules.concentration used by bio.singa.simulation.model.modules.displacement

Class and Description
ModuleState The state of the module is used to schedule the processing of modules in the UpdateScheduler.

Classes in bio.singa.simulation.model.modules.concentration used by bio.singa.simulation.model.modules.qualitative

Class and Description
ModuleState The state of the module is used to schedule the processing of modules in the UpdateScheduler.

Classes in bio.singa.simulation.model.modules.concentration used by bio.singa.simulation.model.modules.qualitative.implementations

Class and Description
ConcentrationDelta The delta object manages the change that will be applied to the concentration of a specific ChemicalEntity in a CellSubsection.

Classes in bio.singa.simulation.model.modules.concentration used by bio.singa.simulation.model.simulation

Class and Description
ConcentrationDelta The delta object manages the change that will be applied to the concentration of a specific ChemicalEntity in a CellSubsection.
LocalError The LocalError object stores the error as an result of the currently applied time step.