Package bio.singa.simulation.model.modules.concentration.imlementations

Interface Summary

Interface	Description
ComplexBuildingReaction.BindeeSectionSelection
ComplexBuildingReaction.BindeeSelection
ComplexBuildingReaction.BinderSectionSelection
ComplexBuildingReaction.BinderSelection
ComplexBuildingReaction.BuilderStep
Diffusion.BuildStep
Diffusion.SelectionStep
DynamicReaction.BuildStep
DynamicReaction.KineticLawStep
DynamicReaction.ParameterStep
MembraneDiffusion.BuildStep
MembraneDiffusion.CargoStep
SingleFileChannelMembraneTransport.BuildStep
SingleFileChannelMembraneTransport.CargoStep
SingleFileChannelMembraneTransport.SolutesStep
SingleFileChannelMembraneTransport.TransporterStep

Class Summary

Class	Description
ComplexBuildingReaction	Complex building or breaking reactions are a special kind of ReversibleReaction.
ComplexBuildingReaction.ComplexBuildingReactionBuilder
Diffusion	Diffusion is the fundamental force governing the random movement of molecules in cells.
Diffusion.DiffusionBuilder
DynamicReaction
DynamicReaction.DynamicReactionBuilder
MembraneDiffusion	The membrane diffusion module describes the movement of chemical entities across Membranes driven by the MembranePermeability of the cargo.
MembraneDiffusion.MembraneDiffusionBuilder
MichaelisMentenReaction
MichaelisMentenReaction.MichaelisMentenReactionBuilder
NthOrderReaction
NthOrderReaction.NthOrderReactionBuilder
Reaction	Reactions in general are ConcentrationBasedModules following the laws of chemical kinetics.
Reaction.Builder<TopLevelType extends Reaction,BuilderType extends Reaction.Builder>
ReversibleReaction	Reversible reactions are Reactions where the substrates form products, and products can also from substrates.
ReversibleReaction.ReversibleReactionBuilder
SingleFileChannelMembraneTransport	The single file channel transport describes the movement of cargo molecules through Transporter proteins, so called membrane channels.
SingleFileChannelMembraneTransport.SingleFileChannelMembraneTransportBuilder