bio.singa.simulation.events

Class EpochUpdateWriter.EpochUpdateWriterBuilder

java.lang.Object

bio.singa.simulation.events.EpochUpdateWriter.EpochUpdateWriterBuilder

All Implemented Interfaces:

EpochUpdateWriter.BuildStep, EpochUpdateWriter.ConcentrationUnitStep, EpochUpdateWriter.EntitiesStep, EpochUpdateWriter.FolderStep, EpochUpdateWriter.ModulesStep, EpochUpdateWriter.SimulationStep, EpochUpdateWriter.TimeUnitStep, EpochUpdateWriter.WorkspaceStep

Enclosing class:

EpochUpdateWriter

public static class EpochUpdateWriter.EpochUpdateWriterBuilder
extends Object
implements EpochUpdateWriter.WorkspaceStep, EpochUpdateWriter.FolderStep, EpochUpdateWriter.SimulationStep, EpochUpdateWriter.EntitiesStep, EpochUpdateWriter.ModulesStep, EpochUpdateWriter.ConcentrationUnitStep, EpochUpdateWriter.TimeUnitStep, EpochUpdateWriter.BuildStep

Constructor Summary

Constructors

Constructor and Description
EpochUpdateWriterBuilder()

Method Summary

Modifier and Type	Method and Description
EpochUpdateWriter.ModulesStep	allEntities()
EpochUpdateWriter.ConcentrationUnitStep	allModules()
EpochUpdateWriter	build()
EpochUpdateWriter.TimeUnitStep	concentrationFormat(QuantityFormatter<MolarConcentration> concentrationFormatter)
EpochUpdateWriter.ModulesStep	entities(Set<ChemicalEntity> observedEntities)
EpochUpdateWriter.SimulationStep	folder(Path folder, boolean timestamped)
EpochUpdateWriter.ConcentrationUnitStep	modules(Set<ConcentrationBasedModule> observedModules)
EpochUpdateWriter.EntitiesStep	simulation(Simulation simulation)
EpochUpdateWriter.BuildStep	timeFormat(QuantityFormatter<javax.measure.quantity.Time> timeFormatter)
EpochUpdateWriter.FolderStep	workspace(Path workspace)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

EpochUpdateWriterBuilder

public EpochUpdateWriterBuilder()

Method Detail

workspace

public EpochUpdateWriter.FolderStep workspace(Path workspace)

Specified by:

workspace in interface EpochUpdateWriter.WorkspaceStep

folder

public EpochUpdateWriter.SimulationStep folder(Path folder,
                                               boolean timestamped)

Specified by:

folder in interface EpochUpdateWriter.FolderStep

simulation

public EpochUpdateWriter.EntitiesStep simulation(Simulation simulation)

Specified by:

simulation in interface EpochUpdateWriter.SimulationStep

entities

public EpochUpdateWriter.ModulesStep entities(Set<ChemicalEntity> observedEntities)

Specified by:

entities in interface EpochUpdateWriter.EntitiesStep

allEntities

public EpochUpdateWriter.ModulesStep allEntities()

Specified by:

allEntities in interface EpochUpdateWriter.EntitiesStep

modules

public EpochUpdateWriter.ConcentrationUnitStep modules(Set<ConcentrationBasedModule> observedModules)

Specified by:

modules in interface EpochUpdateWriter.ModulesStep

allModules

public EpochUpdateWriter.ConcentrationUnitStep allModules()

Specified by:

allModules in interface EpochUpdateWriter.ModulesStep

concentrationFormat

public EpochUpdateWriter.TimeUnitStep concentrationFormat(QuantityFormatter<MolarConcentration> concentrationFormatter)

Specified by:

concentrationFormat in interface EpochUpdateWriter.ConcentrationUnitStep

timeFormat

public EpochUpdateWriter.BuildStep timeFormat(QuantityFormatter<javax.measure.quantity.Time> timeFormatter)

Specified by:

timeFormat in interface EpochUpdateWriter.TimeUnitStep

build

public EpochUpdateWriter build()

Specified by:

build in interface EpochUpdateWriter.BuildStep

Specified by:

build in interface EpochUpdateWriter.ConcentrationUnitStep

Specified by:

build in interface EpochUpdateWriter.EntitiesStep

Specified by:

build in interface EpochUpdateWriter.ModulesStep

Specified by:

build in interface EpochUpdateWriter.TimeUnitStep