bio.singa.simulation.model.simulation

Interface Updatable

All Known Implementing Classes:

AutomatonNode, Vesicle

public interface Updatable

Author:

cl

Method Summary

Modifier and Type	Method and Description
void	addPotentialDelta(ConcentrationDelta delta)
void	applyDeltas()
void	clearPotentialConcentrationDeltas()
void	clearPotentialDeltasBut(UpdateModule module)
Set<CellSubsection>	getAllReferencedSections()
CellRegion	getCellRegion()
javax.measure.Quantity<MolarConcentration>	getConcentration(CellSubsection cellSection, ChemicalEntity chemicalEntity)
ConcentrationContainer	getConcentrationContainer()
List<ConcentrationDelta>	getPotentialSpatialDeltas()
String	getStringIdentifier()
boolean	hasDeltas()
boolean	isObserved()
void	setObserved(boolean observed)
void	shiftDeltas()

Method Detail

getStringIdentifier

String getStringIdentifier()

getConcentrationContainer

ConcentrationContainer getConcentrationContainer()

getConcentration

javax.measure.Quantity<MolarConcentration> getConcentration(CellSubsection cellSection,
                                                            ChemicalEntity chemicalEntity)

getCellRegion

CellRegion getCellRegion()

getAllReferencedSections

Set<CellSubsection> getAllReferencedSections()

getPotentialSpatialDeltas

List<ConcentrationDelta> getPotentialSpatialDeltas()

addPotentialDelta

void addPotentialDelta(ConcentrationDelta delta)

clearPotentialConcentrationDeltas

void clearPotentialConcentrationDeltas()

clearPotentialDeltasBut

void clearPotentialDeltasBut(UpdateModule module)

shiftDeltas

void shiftDeltas()

applyDeltas

void applyDeltas()

hasDeltas

boolean hasDeltas()

setObserved

void setObserved(boolean observed)

isObserved

boolean isObserved()