bio.singa.simulation.model.sections

Class CellSubsection

java.lang.Object

bio.singa.simulation.model.sections.CellSubsection

All Implemented Interfaces:

Observer

public class CellSubsection
extends Object
implements Observer

A cell subsection organizes the contents of a Updatable. Each subsection has its own ConcentrationPool and behaves independently of other subsections in the same CellRegion.

Author:

cl

Field Summary

Fields

Modifier and Type	Field and Description
static CellSubsection	MEMBRANE A general membrane subsection.
static CellSubsection	SECTION_A A cellular subsection "A".
static CellSubsection	SECTION_B A cellular subsection "B".

Constructor Summary

Constructors

Constructor and Description
CellSubsection(String identifier) Creates a new cell subsection with the given identifier and dynamic preferred concentration unit.
CellSubsection(String identifier, boolean dynamicConcentration) Creates a new cell subsection.

Method Summary

Modifier and Type	Method and Description
boolean	equals(Object o)
String	getIdentifier() Returns the identifier.
javax.measure.Unit<MolarConcentration>	getPreferredConcentrationUnit() Returns the preferred concentration unit for this subsection.
int	hashCode()
void	setPreferredConcentrationUnit(javax.measure.Unit<MolarConcentration> preferredConcentrationUnit) Sets the preferred concentration unit for this subsection.
String	toString()
void	update(Observable o, Object arg)

Methods inherited from class java.lang.Object

clone, finalize, getClass, notify, notifyAll, wait, wait, wait

Field Detail

MEMBRANE

public static CellSubsection MEMBRANE

A general membrane subsection.

SECTION_A

public static CellSubsection SECTION_A

A cellular subsection "A".

SECTION_B

public static CellSubsection SECTION_B

A cellular subsection "B".

Constructor Detail

CellSubsection

public CellSubsection(String identifier)

Creates a new cell subsection with the given identifier and dynamic preferred concentration unit.

Parameters:

identifier - The identifier.

CellSubsection

public CellSubsection(String identifier,
                      boolean dynamicConcentration)

Creates a new cell subsection.

Parameters:

identifier - The identifier.

dynamicConcentration - True if the preferred concentration unit should be updated if subsection volume changes.

Method Detail

getIdentifier

public String getIdentifier()

Returns the identifier.

Returns:

The identifier.

getPreferredConcentrationUnit

public javax.measure.Unit<MolarConcentration> getPreferredConcentrationUnit()

Returns the preferred concentration unit for this subsection.

Returns:

The preferred concentration unit.

setPreferredConcentrationUnit

public void setPreferredConcentrationUnit(javax.measure.Unit<MolarConcentration> preferredConcentrationUnit)

Sets the preferred concentration unit for this subsection.

Parameters:

preferredConcentrationUnit - The preferred concentration unit.

toString

public String toString()

Overrides:

toString in class Object

equals

public boolean equals(Object o)

Overrides:

equals in class Object

hashCode

public int hashCode()

Overrides:

hashCode in class Object

update

public void update(Observable o,
                   Object arg)

Specified by:

update in interface Observer